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Proceedings of TDWG
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2006

Proceedings of TDWG 2006

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New TDWG Infrastructure

A Technical Architecture for TDWG Standards Abstract
Roger Hyam
Globally Unique Identifiers (GUID) for Biodiversity Informatics Abstract
Ricardo Scachetti Pereira, Donald Hobern, Roger Hyam, Lee Belbin, Stanley Blum
A Documentation Strategy for TDWG Abstract
Roger Hyam
New Website and Online Collaboration Infrastructure for TDWG Abstract
Ricardo Scachetti Pereira, Lee Belbin, Roger Hyam, Stan Blum, Donald Hobern
TDWG Ongoing Support Abstract
Lee Belbin

New Ideas

Building Biodiversity Information Education: Next Generation Bioinformaticians Abstract
Patrick Bryan Heidorn, Carole Palmer, Dan Wright

Observations

Development of a Provisional Observation Data Standard Capable of Supporting both Species-Based and Ecological Inventory and Monitoring Protocols Abstract
Lynn S Kutner, Bruce A Stein, Donna J Reynolds
Issues of Data Quality in Observational Datasets Abstract
Steve Kelling
The Role of Negative Observation Data in Biodiversity Studies Abstract
Kevin Webb, Steve Kelling

Imaging

MorphBank's Approach to Determination Annotations of Specimen Images, Including the Results of User Trials Abstract
Austin Mast, David Gaitros, Fredrik Ronquist, Peter Jörgensen, Corinne Jörgensen, Greg Riccardi
The Use of Specimen Label Images for Efficient Data Acquisition in Research Collections Cataloguing Abstract
Inyigo Granzow de la Cerda, Juan Carlos Gómez-Martínez, José Luis García-Castillo
Representing and Using Phylogenetic Characters in MorphBank Abstract
Greg Riccardi, David Gaitros, Austin Mast, Fredrik Ronquist

Biodiversity Heritage Library

Botanicus.org: Prototyping a Web 2.0 Interface to Digitized Taxonomic Literature Abstract
Chris Freeland, Douglas Holland
Digitizing the Legacy Literature of Biodiversity: An Introduction to the Biodiversity Heritage Library (BHL) Abstract
Neil Thomson

Building Biodiversity Data Applications

A Web Based GIS Tool for Exploring the World's Biodiversity: The Global Biodiversity Information Facility Mapping and Analysis Portal Application (GBIF MAPA) Abstract
Robert Guralnick, Paul Flemons, David Neufeld, Ajay Ranipeta
3I: On-line Virtual Taxonomic Revisions Abstract
Dmitry A. Dmitriev
TAXI: A Framework for Synchronizing Taxonomic Change Across a Distributed Network Abstract
Maggie Woo, Leah Oliver
The Importance of Standardization of the Data Format: A Case Study from the National Herbarium of the Netherlands Abstract
Luc P.M. Willemse, Johan B. Mols, Peter C Welzen, Erik F Smets
Tracking Our Progress: Improving the Search for Biological Information Online Abstract
Rebecca Shapley
Experiences on the Application of Services Oriented Approaches to the Federation of Heterogeneous Geologic Data Resources Abstract
Douglas R. Fils, Cinzia Cervato
Non-Functional Requirements for Invasive Species Data Exchange Abstract
Robert A. Morris, Michael T. Browne
The New GBIF Data Portal – Web Services and Tools Abstract
Donald Hobern
DNA Barcoding: Bane or Boon (or Both) For Taxonomy? Abstract
Mehrdad Hajibabaei, Gregory Singer, Donal Hickey
Tips for Natural History Institutions: Using Google to Improve the Flow of Biological Information Abstract
Rebecca Shapley
WASABI: Web Application for the Semantic Architecture of Biodiversity Informatics Abstract
Steven Perry, Dave Vieglais
An Internet Platform for Cybertaxonomy Abstract
Walter G. Berendsohn, Malte C. Ebach
ZooBank - The Open-Access Animal Name Registry Abstract
Andrew Polaszek
Taxonomic Literature - Standards and Synergies Abstract
Anna L. Weitzman, Christopher H.C. Lyal
Developing Uncertainty Measures Related to Taxonomic Determinations Abstract
Larry Speers, Arthur David Chapman
The Growth of PLANTS Abstract
Gerald Guala
Aligning Biodiversity Software with User Needs: An Industry and Market Analysis Abstract
Bruce A. Stein, Larry Sugarbaker, Keith Carr, Christopher Lenhardt
EDIT and the European Taxonomic Information Services Abstract
Yde de Jong, Eduard Stloukal
Wetland Information Network Abstract
Santosh Shantaram Gaikwad
Untangling Names: Lessons Learned from the linking of IPNI and TROPICOS Abstract
Julius Welby, Robert Magill, Sally Hinchcliffe
Providing Itinerary Related Datasets and Tools for Integration, Visualisation and Quality Check Abstract
Patricia Mergen, Bart Meganck, Danny Meirte, Javier de la Torre, Michel Louette
Using TAPIR in Biodiversity Networks Abstract
Markus Döring
The Global Invasive Species Information Network / Socio-Technical issues in Invasive Species Data Exchange Abstract
Annie Simpson
Improving Performance and Access to DiGIR Based Data for Applications Including Forecasting for Invasive Species Ranges Abstract
Jim Graham, Greg Newman, Catherine Jarnevich, Thomas Stohlgren
Specify Software Project: Requirements, Design, Components and Support Abstract
Rod Spears, James Beach, Andrew Bentley, Jean Burgess, Kathy Coggins, C.J. Grady, Glenn Garneau, Meg Kumin, Tim Noble, Joshua Stewart
Development of Information Technologies for Botanical Gardens of Russia Abstract
Alexei Prokhorov
A Generic Data Import Layer for the Berlin Taxonomic Information Model Abstract
Anton Güntsch, Walter G. Berendsohn, Andreas Müller
System Architecture of the Avian Knowledge Network Abstract
Tim Levatich, Steve Kelling
The New Norwegian National Thesaurus of Species Names Abstract
Stein Alexander Olsen, Christian-Emil Ore
Federating Taxonomic Databases: Progress With the Catalogue of Life Dynamic Checklist Abstract
Richard J. White, Andrew C. Jones, Frank A. Bisby
The Transition to Taxon Concepts in a World of Legacy Data Abstract
Robert K. Peet, Alan S Weakley, Xianhua Liu, Nico Franz
Invasive Alien Species (IAS): Terminology Abstract
Michael Thomas Browne
PlantCollections Abstract
Boyce Tankersley

Integrating Standards

Exchange of Germplasm Datasets with PyWrapper/BioCASE Abstract
Dag T.F. Endresen, Johan Bäckman, Helmut Knüpffer, Samy Gaiji
PyWrapper v2: Toward a Real Open Source Community Abstract
Javier de la Torre, Markus Döring
Biodiversity Informatics and the GeoWeb: Toward an Integration of TDWG and OGC Standards Abstract
Javier de la Torre, Patricia Mergen, Jorge M. Lobo
An Integrative, Standards-Compliant Framework for TDWG Schemata and Services Abstract
Phillip C. Dibner
TDWG and the OGC: An Update Abstract
Phillip C. Dibner

Workshop

LSID and RDF Hands-on Tutorial Abstract
Kevin Richards, Ricardo Scachetti Pereira, Roger Hyam, Lee Belbin, Donald Hobern

Non Symposium Session

Natural Collections Descriptions: An Introduction to the NCD Data Standard Abstract
Neil Thomson
NLBIF Metadatabase: An Implementation Based on NCD Schema Abstract
Wouter Addink, Ruud Altenburg, Cees Hof
Best Practice For Updating and Versioning of TDWG Standard XML Schemas Abstract
Walter G. Berendsohn, Andrea Hahn, Anton Güntsch, Chuck Miller, Javier de la Torre, Markus Döring, Neil Thomson, Patricia Mergen, Renato De Giovanni, William Ulate, Wouter Addink
The Big Dig Abstract
David Vieglais

Where to from here: Evolving and Emerging Standards

A Web Services API for Fundamental Niche Modelling Abstract
Tim Sutton, Renato De Giovanni
The EFG extension to the ABCD schema Abstract
Wolfgang Kiessling, Charles Copp, Adrian Rissoné, Markus Döring, Heike Mewis
TAPIR 1.0 Abstract
Renato De Giovanni, Markus Döring, Javier de la Torre

Computer Demonstration

The Flora of California: Demonstration of Digital Innovations at the Jepson Flora Project Abstract
Christopher A. Meacham, Bruce G. Baldwin, Jeffrey Greenhouse, Staci Markos, Richard L. Moe, Thomas J. Rosatti, Margriet Wetherwax
TaxonX: A Lightweight and Flexible XML Schema for Mark-up of Taxonomic Treatments Abstract
Terry Catapano, Donat Agosti, Guido Sautter, Drew Koning, Klemens Boehm, Norman F. Johnson, P. Bryan Heidorn, Thomas D. Moritz, Indra Neil Sarkar, Christie Stephenson
Demonstration Proposal: Using Google for Biodiversity Search Features Abstract
Rebecca Shapley
GOLDENGATE, Automation Support for XML Mark-up of Legacy Literature Abstract
Guido Sautter, Donat Agosti, Klemens Böhm, Terry Catapano
A Demonstration of the Atrium Biodiversity Information System Abstract
John P Janovec, Amanda K Neill, Mathias A Tobler, Jason Best, Anton Webber
Specify Software Project: Demonstration of Specify 5 Abstract
J. Beach, A. Bentley, J. Burgess, K. Coggins, C.J. Grady, G Garneau, M. Kumin, T. Noble, R. Spears, CJ Grady, J. Stewart

Poster

Georeferencing Specimens by Combining Expedition Maps with Landsat 7, JERS-1 SAR and SRTM Satellite Imagery Abstract
Niels Raes, Johan B Mols, Luc Willemse, Erik Smets
Benefits of OGC Compliant Standards and Tools for Biogeography Related Information Sharing Abstract
Patricia Mergen, Bart Meganck, Danny Meirte, Franck Theeten, An Tombeur, Michel Louette
The Global Invasive Species Information Network Abstract
Elizabeth Sellers, Annie Simpson
A New Model for Descriptive Knowledge Abstract
Antoine Chalubert, Régine Vignes Lebbe
TDWG and the European Distributed Institute of Taxonomy Abstract
Walter G. Berendsohn
DarwinCoPE, a Proposed Paleontological Extension to DarwinCore 2 Abstract
Jessica Theodor
Introducing 'mx', a Sharable Digital Workbench for Systematic Biologists Abstract
Matthew Yoder, Krishna Dole, Andrew R Deans,
The National Biodiversity Information System of Korea Abstract
Sangyong Kim, Seung Sun Jung
Prototyping a Generic Slice Generation System for the GBIF Index Abstract
Jörg Holetschek, Anton Güntsch, Cristian Oancea, Markus Döring, Walter G. Berendsohn
Collaborative Georeferencing Using WASABI and GEOLocate Abstract
Nelson Rios, Henry L. Bart
NatureServe Vista: A GIS-Based Decision Support System for Conservation Planning Abstract
Kristin Barker, Bruce A. Stein
Variable-Level Nomenclators Abstract
Arturo H. Ariño
CATE - Creating a Taxonomic e-Science Abstract
Benjamin Clark, Malcolm Scoble, C. Godfray, Ian Kitching, S. Mayo
Fonoteca Zoologica (www.FonoZoo.com): The Web-Based Animal Sound Library of the Museo Nacional de Ciencias Naturales Abstract
Rafael Marquez, Gema Solís, Xavier Eekhout, Laura González, Mercedes Pérez
Content Management System for Biodiversity Data Application – Experience in Taiwan Abstract
Hsin-Hui Wu, Kun-Chi Lai, Eric Yen, Alan Yong, Hsin-Yu Chen, Kwang-Tsao Shao, Ching-I Peng
UNIBIO: Integrating Biodiversity Information Using Public and Institutional Archives Abstract
Joaquin Gimenez-Heau
Species Checklist Database and Capacity Building Training in Bangladesh Abstract
Badrul Amin Bhuiya, Mohammad Shawkat Hossain

Ontologies

Developing a Core Ontology for Taxonomic Data Abstract
Jessie Kennedy, Robert Gales, Robert Kukla, Roger Hyam, John R Wieczorek, Gregor Hagedorn, Markus Döring, Dave Vieglais
Converting an Existing Taxonomic Data Resource to Employ an Ontology and LSIDs Abstract
Jessie Kennedy, Robert Gales, Robert Kukla
TOM - The TDWG Ontology Metamodel Abstract
Roger Hyam
TDWG Data Sharing Abstract
Charlie J. Lapham
Ontologizing Morphological Terms for Hymenoptera (Insecta) - Implementing and Benefiting from a Controlled Vocabulary Abstract
Andrew R Deans, Gregory A Riccardi, Fredrik Ronquist